A time relic: a new species of dwarf boa, Tropidophis Bibron, 1840 (Serpentes: Amerophidia), from the Upper Amazon Basin

Keywords: taxonomy, osteology, systematics, Serpentes

Abstract

The amerophidian snake radiation is a Late Cretaceous superfamily that encompasses two families: Aniliidae, pipe snakes, and Tropidophiidae, dwarf boas. We describe a new dwarf boa snake species, from the Tropidophiidae family, from the cloud forest in northeastern Ecuador. Tropidophis cacuangoae sp. nov. can be diagnosed from its congeners based on external and osteological morphology. The new species inhabits eastern tropical piedmont and lower evergreen montane forests, in the Amazon Tropical Rainforest biome, and is likely to be an Ecuadorian endemic. We also discuss the relationships of the new species with South American tropidophiids and provide a key to the identification of mainland South American dwarf boas.

References

Batalha-Filho H., Fjeldså J., Fabre P.H. & Miyaki C.Y. 2013. Connections between the Atlantic and the Amazonian forest avifaunas represent distinct historical events. Journal of Ornithology 154 (1): 41–50. https://doi.org/10.1007/s10336-012-0866-7

Bentley A.G., Reyes-Puig J.P., Yánez-Muñoz M.H., Domínguez F.G. & Sánchez Sarango H.U. 2021. Guía Fotográfica - Herpetofauna del Alto Río Anzu. World Wildlife Fund, Gland, Switzerland.

Bogert C.M. 1968. The variations and affinities of the dwarf boas of the genus Ungaliophis. American Museum Novitates 2340: 1–26.

Brongersma L.D. 1951. Some notes upon the anatomy of Tropidophis and Trachyboa (Serpentes). Zoologische Mededelingen 31 (11): 107–124.

Chan K.O., Hertwig S.T., Neokleous D.N., Flury J.M. & Brown R.M. 2022. Widely used, short 16S rRNA mitochondrial gene fragments yield poor and erratic results in phylogenetic estimation and species delimitation of amphibians. BMC Ecology and Evolution 22 (1): 1–9. https://doi.org/10.1186/s12862-022-01994-y

Coborn J. 1991. The Atlas of Snakes of the World. TFH Publications, Neptune City, NJ.

Cundall D. & Irish F. 2008. The snake skull. In: Gans C., Gaunt A.S. & Adler K. (eds) Biology of Reptilia. The Skull of Lepidosauria: 349–692. Society for the Study of Amphibians and Reptiles Press, USA.

Curcio F.F., Sales Nunes P.M., Argolo A.J.S., Skuk G. & Rodrigues M.T. 2012. Taxonomy of the South American dwarf boas of the genus Tropidophis Bibron, 1840, with the description of two new species from the Atlantic forest (Serpentes: Tropidophiidae). Herpetological Monographs 26 (1): 80–121. https://doi.org/10.1655/HERPMONOGRAPHS-D-10-00008.1

Díaz L.M. & Cádiz A. 2020. A new species of Tropidophis (Squamata: Tropidophiidae) and molecular phylogeny of the Cuban radiation of the genus. Novitates Caribaea 16: 1–9. https://doi.org/10.33800/nc.vi16.222

Drummond A.J., Ashton B., Buxton S., Cheung M., Cooper A. 2011. Geneious v5.4. Available from http://www.geneious.com [accessed 15 December 2022].

Entiauspe-Neto O.M., Abegg A.D., Koch C., Nuñez L.P., Azevedo W.D.S., Moraes L.J., Tiutenko A., Bialves T. & Loebmann D. 2021. A new species of Erythrolamprus (Serpentes: Dipsadidae: Xenodontini) from the savannas of northern South America. Salamandra 57 (2): 196–218.

Ferrarezzi H. 1994. Uma sinopse dos gêneros e classificação das Serpentes (Squamata): I. Scolecophidia e Alethinophidia não colubrídeos. In: Nascimento L.B., Bernardes T.A. & Cotta G.A. (eds) Herpetologia do Brasil Vol. 1: 69–80. Editora PUC-MG Fundação Ezequiel Dias, Fundação Biodiversitas, Belo Horizonte.

Gauthier J.A., Kearney M., Maisano J.A., Rieppel O. & Behlke A.D. 2012. Assembling the squamate tree of life: perspectives from the phenotype and the fossil record. Bulletin of the Peabody Museum of Natural History 53 (1): 3–308. https://doi.org/10.3374/014.053.0101

Goloboff P.A., Farris J.S. & Nixon K.C. 2008. TNT, a free program for phylogenetic analysis. Cladistics 24 (5): 774–786. https://doi.org/10.1111/j.1096-0031.2008.00217.x

Head J.J. 2015. Fossil calibration dates for molecular phylogenetic analysis of snakes 1: Serpentes, Alethinophidia, Boidae, Pythonidae. Palaeontologia Electronica 18 (6FC): 1–17. https://doi.org/10.26879/487

Katoh K., Rozewicki J. & Yamada K.D. 2017. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20 (4): 1160–1166. https://doi.org/10.1093/bib/bbx108

Ledo R.M.D. & Colli G.R. 2017. The historical connections between the Amazon and the Atlantic Forest revisited. Journal of Biogeography 44 (11): 2551–2563. https://doi.org/10.1111/jbi.13049

Lee M.S. & Scanlon J.D. 2002. The Cretaceous marine squamate Mesoleptos and the origin of snakes. Bulletin of the Natural History Museum: Zoology Series 68 (2): 131–142. https://doi.org/10.1017/S0968047002000158

Machado D.J. 2015. YBYRÁ facilitates comparison of large phylogenetic trees. BioMedCentral Bioinformatics 16 (1): 1–4. https://doi.org/10.1186/s12859-015-0642-9

Miralles A., Marin J., Markus D., Herrel A., Hedges S.B. & Vidal N. 2018. Molecular evidence for the paraphyly of Scolecophidia and its evolutionary implications. Journal of Evolutionary Biology 31 (12): 1782–1793. https://doi.org/10.1111/jeb.13373

Montingelli G.G., Barbo F.E., Pereira Filho G.A., Santana G.G., França F.G.R., Grazziotin F.G. & Zaher H. 2020. A second new species for the rare dipsadid genus Caaeteboia Zaher et al., 2009 (Serpentes: Dipsadidae) from the Atlantic Forest of northeastern Brazil. Cuadernos de Herpetología 34: 219–230.

Oelrich T.M. 1956. The anatomy of the head of Ctenosaura pectinata (Iguanidae). Miscellaneous Publications of the Museum of Zoology, University of Michigan 94: 1–59.

Ortega-Andrade H.M., Rodes Blanco M., Cisneros-Heredia D.F., Guerra Arévalo N., López de Vargas-Machuca K.G., Sánchez-Nivicela J.C., et al. 2021. Red List assessment of amphibian species of Ecuador: A multidimensional approach for their conservation. PLoS One 16 (5): e0251027. https://doi.org/10.1371/journal.pone.0251027

O’Shea M. 2018. The Book of Snakes. University of Chicago Press, Chicago, IL.

Peters J.A. 1963. Taxonomic notes on Ecuadorian snakes. Studies on Neotropical Fauna and Environment 3 (1): 57–67. https://doi.org/10.1080/01650526309360366

Peters J.A. & Orejas-Miranda B. 1970. Catalogue of the Neotropical Squamata: Snakes. United States National Museum Bulletin 297: 1–347.

Peters W.C.H. 1860. Eine neue Gattung von Riesenschlangen vor, welche von einem gebornen Preussen, Hrn. Carl Reiss, in Guayaquil nebst mehreren anderen werthvollen Naturalien dem zoologischen Museum zugesandt worden ist. Monatsberichte der königlichen preussische Akademie des Wissenschaften zu Berlin 1860: 200–202.

Pyron R.A., Burbrink F.T. & Wiens J.J. 2013. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes. BMC Evolutionary Biology 13 (1): 1–54. https://doi.org/10.1186/1471-2148-13-93

Reynolds R.G., Niemiller M.L. & Revell L.J. 2014. Toward a Tree-of-Life for the boas and pythons: Multilocus species-level phylogeny with unprecedented taxon sampling. Molecular Phylogenetics and Evolution 71: 201–213. https://doi.org/10.1016/j.ympev.2013.11.011

Savage J.M. & Slowinski J.B. 1992. The colouration of the venomous coral snakes (family Elapidae) and their mimics (families Aniliidae and Colubridae). Biological Journal of the Linnean Society 45 (3): 235–254. https://doi.org/10.1111/j.1095-8312.1992.tb00642.x

Siegel D.S., Miralles A. & Aldridge R.D. 2011. Controversial snake relationships supported by reproductive anatomy. Journal of Anatomy 218 (3): 342–348. https://doi.org/10.1111/j.1469-7580.2010.01334.x

Simões T.R., Caldwell M.W. & Kellner A.W. 2015. A new Early Cretaceous lizard species from Brazil, and the phylogenetic position of the oldest known South American squamates. Journal of Systematic Palaeontology 13 (7): 601–614. https://doi.org/10.1080/14772019.2014.947342

Simpson N., Reyes-Puig C., Tobar C. & Yánez-Muñoz M.H. 2013. Herpetofauna en áreas prioritarias para la conservación: El sistema de Reservas Jocotoco y Ecominga. MECN-JOCOTOCO-ECOMINGA 2013.

Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30 (9): 1312–1313. https://doi.org/10.1093/bioinformatics/btu033

Tamura K., Stecher G. & Kumar S. 2021. MEGA11: molecular evolutionary genetics analysis version 11. Molecular Biology and Evolution 38 (7): 3022–3027. https://doi.org/10.1093/molbev/msab120

Uetz P., Freed P. & Hošek J. 2022. The Reptile Database. Available from http://www.reptile-database.org [accessed 5 Jan. 2022].

Vidal N., Delmas A.S., David P., Cruaud C., Couloux A. & Hedges S.B. 2007. The phylogeny and classification of caenophidian snakes inferred from seven nuclear protein-coding genes. Comptes Rendus Biologies 330 (2): 182–187. https://doi.org/10.1016/j.crvi.2006.10.001

Wang X., Auler A.S., Edwards R.L., Cheng H., Cristalli P.S., Smart P.L. & Shen C.C. 2004. Wet periods in northeastern Brazil over the past 210 kyr linked to distant climate anomalies. Nature 432 (7018): 740–743. https://doi.org/10.1038/nature03067

Wiens J.J., Hutter C.R., Mulcahy D.G., Noonan B.P., Townsend T.M., Sites Jr. J.W. & Reeder T.W. 2012. Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species. Biology Letters 8: 1043–1046. https://doi.org/10.1098/rsbl.2012.0703

Zaher H. 1994. Comments on the evolution of the jaw adductor musculature of snakes. Zoological Journal of the Linnean Society 111 (4): 339–384. https://doi.org/10.1111/j.1096-3642.1994.tb01488.x

Zhang J., Kapli P., Pavlidis P. & Stamatakis A. 2013. A general species delimitation method with applications to phylogenetic placements. Bioinformatics 29 (22): 2869–2876. https://doi.org/10.1093/bioinformatics/btt499

Published
2022-12-29
How to Cite
Ortega-Andrade, H. M., Bentley, A., Koch, C., Yánez-Muñoz, M. H., & Entiauspe-Neto, O. M. (2022). A time relic: a new species of dwarf boa, Tropidophis Bibron, 1840 (Serpentes: Amerophidia), from the Upper Amazon Basin. European Journal of Taxonomy, 854(1), 1-107. https://doi.org/10.5852/ejt.2022.854.2021
Section
Monograph