Punctochaete murina gen. et sp. nov. (Agaricomycetes, Basidiomycota) from southwestern China

Keywords: Auriculariales, biodiversity, mushrooms, molecular systematics, taxonomy, wood-inhabiting fungi, Yunnan Province

Abstract

Wood-inhabiting fungi play an integral role in wood degradation and the cycle of matter in the ecological system. They are considered a ʻkey playerʼ in wood decomposition because of their ability to produce all kinds of enzymes that break down lignin, cellulose and hemicellulose. In this study, some wood-inhabiting mushrooms were collected from the Yunnan-Guizhou Plateau, Asia, and based on the morphological and molecular evidence, they are introduced as Punctochaete murina J.H.Dong & C.L.Zhao gen. et sp. nov. Punctochaete J.H.Dong & C.L.Zhao gen. nov. is characterized by resupinate basidiomata with a punctate hymenial surface, a monomitic hyphal system and generative hyphae bearing clamp connections, and cylindrical to allantoid, thin-walled, smooth, slightly curved basidiospores. Sequences of the internal transcribed spacer (ITS) and large subunit (nLSU) markers of the studied samples were generated, and phylogenetic analyses were performed with maximum likelihood, maximum parsimony and Bayesian inference methods. Phylogenetic analyses of ITS+nLSU nuclear RNA gene regions showed that Punctochaete forms a monophyletic lineage within the order Auriculariales in which it is sister to a clade comprising two closely related genera: Exidiopsis and Tremellochaete.

References

Alvarenga R.L.M. & Gibertoni T.B. 2021. Crystallodon Alvarenga gen. nov., a new genus of the Auriculariales from the Neotropics. Cryptogamie Mycologie 42 (2): 17–24. https://doi.org/10.5252/cryptogamie-mycologie2021v42a2

Alvarenga R.L.M., Spirin V., Malysheva V., Gibertoni T.B. & Larsson K.H. 2019. Two new genera and six other novelties in Heterochaete sensu lato (Auriculariales, Basidiomycota). Botany 97 (8): 439–451. https://doi.org/10.1139/cjb-2019-0046

Bernicchia A. & Gorjón S.P. 2010. Fungi Europaei 12: Corticiaceae s.l. Edizioni Candusso, Lomazzo.

Burt E.A. 1915. The Thelephoraceae of North America. V. Tremellodendron, Eichleriella, and Sebacina. Annals of the Missouri Botanical Garden 2 (4): 731–770. https://doi.org/10.2307/2989955

Chen Y.L, Su M.S., Zhang L.P., Zou Q., Wu F., Zeng N.K. & Liu M. 2020. Pseudohydnum brunneiceps (Auriculariales, Basidiomycota), a new species from Central China. Phytotaxa 441 (1): 87–94. https://doi.org/10.11646/phytotaxa.441.1.8

Cui B.K., Li H.J., Ji X., Zhou J.L., Song J., Si J., Yang Z.L. & Dai Y.C. 2019. Species diversity, taxonomy and phylogeny of Polyporaceae (Basidiomycota) in China. Fungal Diversity 97: 137–392. https://doi.org/10.1007/s13225-019-00427-4

Dai Y.C., Cui B.K., Si J., He S.H., Hyde K.D., Yuan H.S., Liu X.Y. & Zhou L.W. 2015. Dynamics of the worldwide number of fungi with emphasis on fungal diversity in China. Mycological Progress 14: Art. 62. https://doi.org/10.1007/s11557-015-1084-5

Dai Y.C., Yang Z.L., Cui B.K., Wu G., Yuan H.S., Zhou L.W., He S.H., Ge Z.W., Wu F., Wei Y.L., Yuan Y. & Si J. 2021. Diversity and systematics of the important macrofungi in Chinese forests. Mycosystema 40: 770–805. https://doi.org/10.13346/j.mycosystema.210036

Darriba D., Taboada G.L., Doallo R. & Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9 : Art. 772. https://doi.org/10.1038/nmeth.2109

Dong J.H., Gu J.Y. & Zhao C.L. 2023a. Diversity of wood-decaying fungi in Wenshan Area, Yunnan Province, China. Mycosystema 42: 638–662. https://doi.org/10.13346/j.mycosystema.220205

Dong J.H., Zhang X.C., Chen J.J., Zhu Z.L. & Zhao C.L. 2023b. A phylogenetic and taxonomic study on Steccherinum (Polyporales, Basidiomycota): focusing on three new Steccherinum species from Southern China. Frontiers in Cellular and Infection Microbiology 12 : Art. 1103579. https://doi.org/10.3389/fcimb.2022.1103579

Dong J., Zhu Y., Qian C. & Zhao C. 2024a. Taxonomy and phylogeny of Auriculariales (Agaricomycetes, Basidiomycota) with descriptions of four new species from southwestern China. MycoKeys 108: 115–146. https://doi.org/10.3897/mycokeys.108.128659

Dong J.H., Li Q., Yuan Q., Luo Y.X., Zhang X.C., Dai Y.F., Zhou Q., Liu X.F., Deng Y.L., Zhou H.M., Muhammad A. & Zhao C.L. 2024b. Species diversity, taxonomy, molecular systematics and divergence time of wood-inhabiting fungi in Yunnan-Guizhou Plateau, Asia. Mycosphere 15 (1): 1110–1293. https://doi.org/10.5943/mycosphere/15/1/10

Dong J.H., Gu Z.R., Wang Y.Y., Shi Y.M. & Zhao C.L. 2024c. A new corticioid fungus, Alloexidiopsis sinensis (Auriculariales, Basidiomycota), in China, evidenced by morphological characteristics and phylogenetic analyses. Phytotaxa 658 (3): 227–239. https://doi.org/10.11646/phytotaxa.658.3.1

Duan Z.Y., Guan Q.X., Luo K.Y. & Zhao C.L. 2023. Morphological and molecular identification of three new resupinate species of Hyphoderma (Hyphodermataceae, Agaricomycetes) from East Asia. Phytotaxa 599 (1): 1–19. https://doi.org/10.11646/phytotaxa.599.1.1

Felsenstein J. 1985. Confidence intervals on phylogenetics: an approach using bootstrap. Evolution 39 (4): 783–791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x

Hibbett D.S., Binder M., Bischoff J.F., Blackwell M., Cannon P.F., Eriksson O.E., Huhndorf S., James T., Kirk P.M., Lücking R., Thorsten Lumbsch H., Lutzoni F., Matheny P.B., McLaughlin D.J., Powell M.J., Redhead S., Schoch C.L., Spatafora J.W., Stalpers J.A. … & Zhang N. 2007. A higher-level phylogenetic classification of the Fungi. Mycological Research 111 (5): 509–547. ttps://doi.org/10.1016/j.mycres.2007.03.004

Hibbett D.S., Bauer R., Binder M., Giachini A.J., Hosaka K., Justo A., Larsson E., Larsson K.H., Lawrey J.D., Miettinen O., Nagy L.G., Nilsson R.H., Weiss M. & Thorn R.G. 2014. 14 Agaricomycetes. In: McLaughlin D. & Spatafora J. (eds) Systematics and Evolution. The Mycota, Vol. 7A: 373–430. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-55318-9_14

Hu Y., Karunarathna S.C., Li H., Galappaththi M.C., Zhao C.L., Kakumyan P. & Mortimer P.E. 2022. The impact of drying temperature on basidiospore size. Diversity 14 (4): Art. 239. https://doi.org/10.3390/d14040239

Hyde K.D. 2022. The numbers of fungi. Fungal Diversity 114: 1. https://doi.org/10.1007/s13225-022-00507-y

Hyde K.D., Baldrian P., Chen Y., Chethana K.W.T., Hoog S.D., Doilom M., Gomes de Farias A.R., Gonçalves M.F.M., Gonkhom D., Gui H., Hilário S., Hu Y., Jayawardena R.S., Khyaju S., Kirk P.M., Kohout P., Luangharn T., Maharachchikumbura S.S.N., Manawasinghe I.S. … & Walker A. 2024. Current trends, limitations and future research in the fungi? Fungal Diversity 125: 1–71. https://doi.org/10.1007/s13225-023-00532-5

Ji X., Zhou J.L., Song C.G., Xu T.M., Wu D.M. & Cui B.K. 2022. Taxonomy, phylogeny and divergence times of Polyporus (Basidiomycota) and related genera. Mycosphere 13 (1): 1–52. https://doi.org/10.5943/mycosphere/13/1/1

Katoh K., Rozewicki J. & Yamada K.D. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 20 (4): 1160–1166. https://doi.org/10.1093/bib/bbx108

Larsson A. 2014. AliView: a fast and lightweight alignment viewer and editor for large data sets. Bioinformatics 30 (22): 3276–3278. https://doi.org/10.1093/bioinformatics/btu531

Li Q., Luo Y.X. & Zhao C.L. 2024. Molecular systematics and taxonomy reveal three new wood inhabiting fungal species (Basidiomycota) from Yunnan Province, southern China. Mycological Progress 23: Art. 30. https://doi.org/10.1007/s11557-024-01968-y

Li Q.Z., Liu SL., Wang X.W., May T.W. & Zhou L.W. 2022. Redelimitation of Heteroradulum (Auriculariales, Basidiomycota) with H. australiense sp. nov. MycoKeys 86: 87–101. https://doi.org/10.3897/mycokeys.86.76425

Liu S., Shen L.L., Xu T.M., Song C.G., Gao N., Wu D.M., Sun Y.F. & Cui B.K. 2023. Global diversity, molecular phylogeny and divergence times of the brown rot fungi within the Polyporales. Mycosphere 14 (1): 1564–1664. https://doi.org/10.5943/mycosphere/14/1/18

Liu S.L, Shen Z.Q., Li Q.Z., Liu X.Y. & Zhou L.W. 2022. Alloexidiopsis gen. nov., a revision of generic delimitation in Auriculariales (Basidiomycota). Frontiers in Microbiology 13: Art. 894641. https://doi.org/10.3389/fmicb.2022.894641

Lutzoni F., Kauff F., Cox C.J., McLaughlin D., Celio G., Dentinger B., Padamsee M., Hibbett D., James T.Y., Baloch E., Grube M., Reeb V., Hofstetter V., Schoch C., Arnold A.E., Miadlikowska J., Spatafora J., Johnson D., Hambleton S. … & Vilgalys R. 2004. Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. American Journal of Botany 91 (10): 1446–1480. https://doi.org/10.3732/ajb.91.10.1446

Malysheva V. & Spirin V. 2017. Taxonomy and phylogeny of the Auriculariales (Agaricomycetes, Basidiomycota) with stereoid basidiocarps. Fungal Biology 121 (8): 689–715. https://doi.org/10.1016/j.funbio.2017.05.001

Malysheva V., Spirin V., Miettinen O., Motato-Vásquez V., Hernawati J.S.S.S. & Larsson K.H. 2018. Revision of Protohydnum (Auriculariales, Basidiomycota). Mycological Progress 17: 805–814. https://doi.org/10.1007/s11557-018-1393-6

Mao W.L., Wu Y.D., Liu H.G., Yuan Y. & Dai Y.C. 2023. A contribution to Porogramme (Polyporaceae, Agaricomycetes) and related genera. IMA fungus 14: Art. 5. https://doi.org/10.1186/s43008-023-00110-z

Miettinen O., Spirin V. & Niemelä T. 2012. Notes on the genus Aporpium (Auriculariales, Basidiomycota), with a new species from temperate Europe. Annales Botanici Fennici 49 (5): 359–368. https://doi.org/10.5735/085.049.0607

Miller M.A., Pfeiffer W. & Schwartz T. 2012. The CIPRES science gateway: enabling high-impact science for phylogenetics researchers with limited resources. Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment: Bridging from the Extreme to the Campus and Beyond 39: 1–8. Chicago, IL, USA. https://doi.org/10.1145/2335755.2335836

Möller A. 1895. Protobasidiomyceten. In: Schimper A.F.W. (ed.) Botanische Mitteilungen aus den Tropen. 8: 1–180. Gustav Fischer, Jena. https://doi.org/10.5962/bhl.title.3752

Petersen J.H. 1996. Farvekort. The Danish Mycological Society’s Colour-Chart. Foreningen til Svampekundskabens Fremme, Greve, Germany.

Raitviir A. 1964. Some new species and a new genus of Discomycetes and Heterobasidiomycetidae. Eesti NSV Teaduste Akadeemia Toimetised 13 (1): 28–32. https://doi.org/10.3176/biol.1964.1.05

Raitviir A. & Wells K. 1966. Two new species of Exidiopsis. Eesti NSV Teaduste Akadeemia Toimetised 15 (2): 206–209. https://doi.org/10.3176/biol.1966.2.06

Rathnayaka A.R., Tennakoon D.S., Jones G.E., Wanasinghe D.N., Bhat D.J., Priyashantha A.H., Stephenson S.L., Tibpromma S. & Karunarathna S.C. 2024. Significance of precise documentation of hosts and geospatial data of fungal collections, with an emphasis on plant-associated fungi. New Zealand Journal of Botany 62: 1–28. https://doi.org/10.1080/0028825X.2024.2381734

Ronquist F., Teslenko M., van der Mark P., Ayres D.L., Darling A., Hohna S., Larget B., Liu L., Suchard M.A. & Huelsenbeck J.P. 2012. MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Molecular Systems Biology 61 (3): 539–542. https://doi.org/10.1093/sysbio/sys029

Shen Y. & Fan L. 2020. Morphological and molecular analyses reveal two new species of Guepinia from China. Phytotaxa 475 (2): 91–101. https://doi.org/10.11646/phytotaxa.475.2.3

Sotome K., Maekawa N., Nakagiri A., Lee S.S. & Hattori T. 2014. Taxonomic study of Asian species of poroid Auriculariales. Mycological Progress 13: 987–997. https://doi.org/10.1007/s11557-014-0984-0

Spirin V., Malysheva V. & Larsson K.H. 2018. On some forgotten species of Exidia and Myxarium (Auriculariales, Basidiomycota). Nordic Journal of Botany 36 (3): Art. e01601. https://doi.org/10.1111/njb.01601

Spirin V., Malysheva V., Roberts P., Trichies G., Savchenko A. & Larsson K.H. 2019a. A convolute diversity of the Auriculariales (Agaricomycetes, Basidiomycota) with sphaeropedunculate basidia. Nordic Journal of Botany 37 (7): Art. e02394. https://doi.org/10.1111/njb.02394

Spirin V., Malysheva V., Miettinen O., Vlasák J., Alvarenga R.L.M., Gibertoni T.B., Ryvarden L. & Larsson K.H. 2019b. On Protomerulius and Heterochaetella (Auriculariales, Basidiomycota). Mycological Progress 18: 1079–1099. https://doi.org/10.1007/s11557-019-01507-0

Swofford D.L. 2002. PAUP*: Phylogenetic Analysis Using parsimony (*and Other Methods), Version 4.0b10. Sinauer Associates, Sunderland, MA, USA.

Tedersoo L., Bahram M., Põlme S., Kõljalg U., Yorou N.S., Wijesundera R., Villarreal Ruiz L., Vasco-Palacios A.M., Thu P.Q., Suija A., Smith M.E., Sharp C., Saluveer E., Saitta A., Rosas M., Riit T., Ratkowsky D., Pritsch K., Põldmaa K. … & Abarenkov K. 2014. Fungal biogeography. Global diversity and geography of soil fungi. Science 346: Art. 1256688. https://doi.org/10.1126/science.1256688

Tohtirjap A., Hou S.X., Rivoire B., Gates G., Wu F. & Dai Y.C. 2023.Two new species of Exidia sensu lato (Auriculariales, Basidiomycota) based on morphology and DNA sequences. Frontiers in Microbiology 13: Art. 1080290. https://doi.org/10.3389/fmicb.2022.1080290

Wang S. & Thorn R.G. 2021. Exidia qinghaiensis, a new species from China. Mycoscience 62 (3): 212–216. https://doi.org/10.47371/mycosci.2021.03.002

Wang X.W., May T.W., Liu S.L. & Zhou L.W. 2021. Towards a natural classification of Hyphodontia sensu lato and the trait evolution of basidiocarps within Hymenochaetales (Basidiomycota). Journal of Fungi 7 (6): 478. https://doi.org/10.3390/jof7060478

Weiss M. & Oberwinkler F. 2001. Phylogenetic relationships in Auriculariales and related groups – hypotheses derived from nuclear ribosomal DNA sequences. Mycological Research 105 (4): 403–415. https://doi.org/10.1017/S095375620100363X

Wells K. 1961. Studies of some Tremellaceae. IV. Exidiopsis. Mycologia 53 (4): 317–370. https://doi.org/10.1080/00275514.1961.12017967

Wells K. & Bandoni R.J. 2001. Heterobasidiomycetes. In: McLaughlin D.J., McLaughlin E.G. & Lemke P.A. (eds) The Mycota. (A Comprehensive Treatise on Fungi as Experimental Systems for Basic and Applied Research), Vol. 7B: 85–120. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-10189-6_4

Wells K. & Raitviir A. 1980. The species of Eichleriella (Tremellaceae) of the USSR. Mycologia 72 (3): 564–577. https://doi.org/10.1080/00275514.1980.12021219

White T.J., Bruns T., Lee S. & Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M.A., Gelfand D.H., Sninsky J.J. & White T.J. (eds) PCR protocols: A guide to methods and applications: 315–322. Academic Press, San Diego. https://doi.org/10.1016/B978-0-12-372180-8.50042-1

Wu F., Zhou L.W., Yang Z.L., Bau T., Li T.H. & Dai Y.C. 2019. Resource diversity of Chinese macrofungi: edible, medicinal and poisonous species. Fungal Diversity 98: 1–76. https://doi.org/10.1007/s13225-019-00432-7

Wu F., Zhao Q., Yang Z.L., Ye S.Y., Rivoire B. & Dai Y.C. 2020. Exidia yadongensis, a new edible species from East Asia. Mycosystema 39: 1203–1214. https://doi.org/10.13346/j.mycosystema.200205

Wu F., Tohtirjap A., Fan L.F., Zhou L.W., Alvarenga R.L.M., Gibertoni T.B. & Dai Y.C. 2021. Global diversity and updated phylogeny of Auricularia (Auriculariales, Basidiomycota). Journal of Fungi 7 (11): Art. 933. https://doi.org/10.3390/jof7110933

Wu F., Man X.W., Tohtirjap A. & Dai Y.C. 2022a. A comparison of polypore funga and species composition in forest ecosystems of China, North America, and Europe. Forest Ecosystems 9: Art. 100051. https://doi.org/10.1016/j.fecs.2022.100051

Wu F., Zhou L.W., Vlasák J. & Dai Y.C. 2022b. Global diversity and systematics of Hymenochaetaceae with poroid hymenophore. Fungal Diversity 113: 1–192. https://doi.org/10.1007/s13225-021-00496-4

Yang Y., Li R., Liu C.M. & Zhao C.L. 2023. Morphological and molecular identification for two new species of wood-inhabiting macrofungi (Basidiomycota) from Yunnan-Guizhou Plateau, China. Phytotaxa 591 (1): 1–18. https://doi.org/10.11646/phytotaxa.591.1.1

Yang Y., Li R., Jiang Q.Q., Zhou H.M., Muhammad A., Wang H.J. & Zhao C.L. 2024. Phylogenetic and taxonomic analyses reveal three new wood-inhabiting fungi (Polyporales, Basidiomycota) in China. Journal of Fungi 10 (1): Art. 55. https://doi.org/10.3390/jof10010055

Ye S.Y., Zhang Y.B., Wu F. & Liu H.X. 2020. Multi-locus phylogeny reveals two new species of Exidia (Auriculariales, Basidiomycota) from China. Mycological Progress 19: 859–868. https://doi.org/10.1007/s11557-020-01601-8

Yu J., Cai J., Liu H.G. & Zhao C.L. 2023. Molecular systematics and taxonomy reveal three new taxa in Phanerochaete (Phanerochaetaceae, Polyporales) from the Yunnan–Guizhou plateau, East Asia. Mycological Progress 22: Art. 59. https://doi.org/10.1007/s11557-023-01903-7

Yuan Q., Luo K.Y., Zhang Y. & Zhao C.L. 2023. Morphological characteristics and phylogenetic analyses revealed three new wood-inhabiting fungi (Agaricomycetes, Basidiomycota) in Southern China. Phytotaxa 592 (2): 179–195. https://doi.org/10.11646/phytotaxa.592.3.1

Zhang X.C., Li Y.C., Wang Y.Y., Xu Z., Zhao C.L. & Zhou H.M. 2024. Xylodon asiaticus (Hymenochaetales, Basidiomycota), a new species of corticioid fungus from southern China. Phytotaxa 634 (1): 1–15. https://doi.org/10.11646/phytotaxa.634.1.1

Zhao C.L. & Wu Z.Q. 2017. Ceriporiopsis kunmingensis sp. nov. (Polyporales, Basidiomycota) evidenced by morphological characters and phylogenetic analysis. Mycological Progress 16: 93–100. https://doi.org/10.1007/s11557-016-1259-8

Zhao C.L., Qu M.H., Huang R.X. & Karunarathna S.C. 2023. Multi‐gene phylogeny and taxonomy of the wood‐rotting fungal genus Phlebia sensu lato (Polyporales, Basidiomycota). Journal of Fungi 9 (3): 320. https://doi.org/10.3390/jof9030320

Zhao H., Wu Y.D., Yang Z.R., Liu H.G., Wu F., Dai Y.C. & Yuan Y. 2024. Polypore funga and species diversity in tropical forest ecosystems of Africa, America and Asia, and a comparison with temperate and boreal regions of the Northern Hemisphere. Forestry Ecosystems 11: Art. 100200. https://doi.org/10.1016/j.fecs.2024.100200

Zhou H.M., Gu Z.R. & Zhao C.L. 2024. Molecular phylogeny and morphology reveal a new species of Asterostroma from Guizhou Province, China. Phytotaxa 634 (2): 1–15. https://doi.org/10.11646/phytotaxa.635.2.7

Zhou L.W. & Dai Y.C. 2013. Phylogeny and taxonomy of poroid and lamellate genera in the Auriculariales (Basidiomycota). Mycologia 105 (5): 1219–1230. https://doi.org/10.3852/12-212

Published
2025-03-12
How to Cite
Dong, J., Li, Q., Su, J., & Zhao, C. (2025). Punctochaete murina gen. et sp. nov. (Agaricomycetes, Basidiomycota) from southwestern China. European Journal of Taxonomy, 981(1), 96-113. https://doi.org/10.5852/ejt.2025.981.2821
Section
Research article