A new western Atlantic snapping shrimp of the Alpheus macrocheles group (Caridea, Alpheidae) revealed by morphological, molecular and color data
Abstract
References
Almeida A.O., Boehs G., Araújo-Silva C.L. & Bezerra L.E.A. 2012. Shallow-water caridean shrimps from southern Bahia, Brazil, including the first record of Synalpheus ul (Ríos & Duffy, 2007) (Alpheidae) in the southwestern Atlantic Ocean. Zootaxa 3347: 1–35. https://doi.org/10.11646/zootaxa.3347.1.1
Almeida A.O., Terossi M., Araújo-Silva C.L. & Mantelatto F.L. 2013. Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data. Zootaxa 3652: 437–452. https://doi.org/10.11646/zootaxa.3652.4.3
Almeida A.O., Terossi M. & Mantelatto F.L. 2014. Morphology and DNA analyses reveal a new cryptic snapping shrimp of the Alpheus heterochaelis Say, 1818 (Decapoda: Alpheidae) species complex from the western Atlantic. Zoosystema 36: 53–71. https://doi.org/10.5252/z2014n1a4
Alves M.L., Ramos-Porto M. & Viana G.F.S. 2008. Checklist of the decapods (Crustacea) from the Fernando de Noronha Archipelago, Brazil. Zootaxa 1881: 43–68. https://doi.org/10.11646/zootaxa.1881.1.2
Anker A. 2012. Revision of the western Atlantic members of the Alpheus armillatus H. Milne Edwards, 1837 species complex (Decapoda, Alpheidae), with description of seven new species. Zootaxa 3386: 1–109. https://doi.org/10.11646/zootaxa.3386.1.1
Anker A. & De Grave S. 2012. Description of Alpheus cedrici sp. n., a strikingly coloured snapping shrimp (Crustacea, Decapoda, Alpheidae) from Ascension Island, central Atlantic Ocean. ZooKeys 183: 1–15. https://doi.org/10.3897/zookeys.183.3073
Anker A. & Nizinski M. 2011. Description of the new deep-water species of Alpheus Fabricius, 1798 from the Gulf of Mexico (Crustacea, Decapoda, Alpheidae). Zootaxa 2925: 49–56. https://doi.org/10.11646/zootaxa.2925.1.5
Anker A., Ahyong S.T., Noël P.Y. & Palmer A.R. 2006. Morphological phylogeny of alpheid shrimps: parallel preadaptation and the origin of a key morphological innovation, the snapping claw. Evolution 60: 2507–2528. https://doi.org/10.1111/j.0014-3820.2006.tb01886.x
Anker A., Hurt C. & Knowlton N. 2009. Description of cryptic taxa within the Alpheus bouvieri A. Milne-Edwards, 1878 and A. hebes Kim & Abele, 1988 species complexes (Crustacea: Decapoda: Alpheidae). Zootaxa 2153: 1–23. https://doi.org/10.11646/zootaxa.2153.1.1
Banner A.H. 1953. The Crangonidae, or snapping shrimp, of Hawaii. Pacific Science 7: 3–147.
Barros M.P. & Pimentel F.R. 2001. A fauna de Decapoda (Crustacea) do Estado do Pará, Brasil: Lista preliminar das espécies. Boletim do Museu Paraense Emilio Goeldi, série Zoologia 17: 15–41.
Bracken H.D., De Grave S. & Felder D.L. 2009. Phylogeny of the Infraorder Caridea based on mitochondrial and nuclear genes (Crustacea: Decapoda). In: Martin J.W., Crandall K.A. & Felder D.L. (eds) Decapod Crustacean Phylogenetics: 281–305. Crustacean Issues 18. CRC Press, Boca Raton, London, New York.
Bracken-Grissom H.D., Robles R. & Felder D.L. 2014. Molecular phylogenetics of American snapping shrimps allied to Alpheus floridanus Kingsley, 1878 (Crustacea: Decapoda: Alpheidae). Zootaxa 3895: 492–502. https://doi.org/10.11646/zootaxa.3895.4.2
Chace Jr. F.A. 1972. The shrimps of the Smithsonian-Bredin Caribbean Expeditions with a summary of the West Indian shallow-water species (Crustacea: Decapoda: Natantia). Smithsonian Contributions to Zoology 98: 1–179. https://doi.org/10.5479/si.00810282.98
Christoffersen M.L. 1979. Decapod Crustacea: Alpheoida. Campagne de la Calypso au large des côtes atlantiques de l’Amérique du Sud (1961–1962). I. 36. Annales de l’Institute Océanographique, Monaco Suppl. 55: 297–377.
Christoffersen M.L. 1998. Malacostraca. Eucarida. Caridea. Crangonoidea and Alpheoidea (Except Glyphocrangonidae and Crangonidae). In: Young P.S. (ed) Catalogue of Crustacea of Brazil, Série livros n. 6: 351–372. Museu Nacional, Rio de Janeiro.
Coelho P.A. & Ramos M.A. 1972. A constituição e a distribuição da fauna de decápodos do litoral leste da América do Sul entre as latitudes de 5º N e 39º S. Trabalhos Oceanográficos da Universidade Federal de Pernambuco 13: 133–236. https://doi.org/10.5914/tropocean.v13i1.2555
Coelho P.A. & Ramos-Porto M.A. 1980. Crustáceos decápodos da costa do Maranhão, Brasil. Boletim do Instituto Oceanográfico 29: 135–138. https://doi.org/10.1590/S0373-55241980000200028
Coelho P.A. & Ramos-Porto M.A. 1995. Distribuição ecológica dos crustáceos decápodos marinhos do Nordeste do Brasil. Trabalhos Oceanográficos da Universidade Federal de Pernambuco 23: 113–127. https://doi.org/10.5914/tropocean.v23i1.2682
Coelho P.A., Ramos-Porto M. & Koening M.L. 1980. Biogeografia e bionomia dos crustáceos do litoral equatorial brasileiro. Trabalhos Oceanográficos da Universidade Federal de Pernambuco 15: 7–138. https://doi.org/10.5914/tropocean.v15i1.2573
Coelho P.A., Ramos-Porto M. & Calado T.C.S. 1986. Litoral do Rio Grande do Norte: Decapoda. Caderno Ômega da Universidade Federal Rural de Pernambuco, Série Ciências Aquáticas, Recife 2: 79–105.
Coelho P.A., Almeida A.O., Souza-Filho J.F., Bezerra L.E.A. & Giraldes B.W. 2006. Diversity and distribution of the marine and estuarine shrimps (Dendrobranchiata, Stenopodidea and Caridea) from North and Northeast Brazil. Zootaxa 1221: 41–62. https://doi.org/10.11646/zootaxa.1221.1.5
Coelho Filho P.A. 2006. Checklist of the Decapods (Crustacea) from the outer continental shelf and seamounts from Northeast of Brazil - REVIZEE Program (NE III). Zootaxa 1184: 1–27. https://doi.org/10.11646/zootaxa.1184.1.1
Coleman C.O. 2003 “Digital inking”: How to make perfect line drawings on computers. Organisms, Diversity and Evolution 3 (4): 303–304. https://doi.org/10.1078/1439-6092-00081
Coleman C.O. 2009. Drawing setae the digital way. Zoosystematics and Evolution 85: 305–310. https://doi.org/10.1002/zoos.200900008
Coutière H. 1897. Note sur quelques genres nouveaux ou peu connus d’Alphéidés, formant la sousfamille des Alphéopsidés. Bulletin du Muséum d’histoire naturelle 2: 380–386.
Coutière H. 1905. Les Alpheidae. In: Gardiner J.S. (ed.) The Fauna and Geography of the Maldive and Laccadive Archipelagoes. Being the account of the work carried on and of the Collections made by an Expedition during the years 1899 and 1900: 852–921. University Press, Cambridge. https://doi.org/10.5962/bhl.title.10215
Crandall K.A. & Fitzpatrick Jr. J.F. 1996 Crayfish molecular systematics: using a combination of procedures to estimate phylogeny. Systematic Biology 45: 1–26. https://doi.org/10.1093/sysbio/45.1.1
Crosnier A. & Forest J. 1966. Crustacés Décapodes: Alpheidae. In: Campagnes de la Calypso dans le Golfe de Guinée et aux Îles Principe, São Tomé et Annobon (1956), et Campagne aux Îles du Cap Vert (1959). Part 19: Résultats Scientifiques des Campagnes de la Calypso 7(27). Annales de l’Institut Océanographique de Monaco 44: 199–314.
Darriba D., Taboada G.L., Doallo R. & Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772. https://doi.org/10.1038/nmeth.2109
De Grave S. & Fransen C.H.J.M. 2011. Carideorum catalogus: the recent species of the dendrobranchiate, stenopodidean, procarididean and caridean shrimps (Crustacea: Decapoda). Zoologische Mededelingen 89: 195–589.
De Grave S., Anker A., Dworschak P.C., Clark P.F. & Wirtz P. 2017. An updated checklist of the marine Decapoda of Asension Island, central Atlantic Ocean. Journal of the Marine Biological Association of the United Kingdom 97: 759–770. https://doi.org/10.1017/S0025315414001295
Dehghani A., Sari A. & Naderloo R. 2019. Three new species of narrowly endemic snapping shrimp, genus Alpheus (Decapoda: Caridea: Alpheidae) from the Persian Gulf. Journal of the Marine Biological Association of the United Kingdom 99: 911–920. https://doi.org/10.1017/S0025315418000693
Drummond A.J., Suchard M.A., Xie D. & Rambaut A. 2012. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution 29: 1969–1973. https://doi.org/10.1093/molbev/mss075
Edgar R.C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792–1797. https://doi.org/10.1093/nar/gkh340
Fausto Filho J. 1980. Crustáceos estomatópodos e decápodos dos substratos de cascalho do nordeste brasileiro. Ciências Agronômicas 10: 109–124.
Guterres L.F.R., Melo G.A.S. & Guterres P.M.C. 2005. Novos registros da ocorrência de Alpheus macrocheles (Crustacea, Caridea, Alpheidae) na costa do Brasil. Biociências 13: 231–233.
Hailstone S. 1835. The species of crustaceous animals discovered and described by Mr. Hailstone, and illustrated and annotated upon by Mr. Westwood. The Magazine of Natural History and Journal of Zoology, Botany, Mineralogy, Geology and Meteorology 8: 394–395.
Hall T. 2005. BioEdit 7.0.5. North Carolina State University, Department of Microbiology. Available from http://www.mbio.ncsu.edu/BioEdit/bioedit.html [accessed 30 Oct. 2019].
Holthuis L.B. 1951. The caridean Crustacea of tropical West Africa. Atlantide Report 2: 1–187.
Kim W. & Abele L.G. 1988. The snapping shrimp genus Alpheus from the eastern Pacific (Decapoda, Caridea, Alpheidae). Smithsonian Contributions to Zoology 454: 1–119. https://doi.org/10.5479/si.00810282.454
Komai T. & Ohtomi J. 2018. A new deep-sea species of the snapping shrimp genus Alpheus Fabricius, 1798 (Decapoda: Caridea: Alpheidae) from Kagoshima Bay, Japan. Zootaxa 4434: 99–110. https://doi.org/10.11646/zootaxa.4434.1.6
Mantelatto F.L., Robles R., Schubart C.D. & Felder D.L. 2009. Molecular phylogeny of the genus Cronius Stimpson, 1860, with reassignment of C. tumidulus and several American species of Portunus to the genus Achelous De Haan, 1833 (Brachyura: Portunidae). In: Martin J.L., Crandall K.A. & Felder D.L. (eds) Decapod Crustacean Phylogenetics: 567–579. CRC Press, Boca Raton, Florida, USA.
Mantelatto F.L., Terossi M., Negri M., Buranelli R.C., Robles R., Magalhães T., Tamburus A.F., Rossi N. & Miyazaki M.J. 2018. DNA sequence database as a tool to identify decapod crustaceans on the São Paulo coastline. Mitochondrial DNA Part A 29: 805–815. https://doi.org/10.1080/24701394.2017.1365848
Mathews L.M. 2006. Cryptic biodiversity and phylogeographic patterns in a snapping shrimp species complex. Molecular Ecology 15: 4049–4063. https://doi.org/10.1111/j.1365-294X.2006.03077.x
Mathews L.M. & Anker A. 2009. Molecular phylogeny reveals extensive ancient and ongoing radiations in a snapping shrimp species complex (Crustacea, Alpheidae, Alpheus armillatus). Molecular Phylogenetics and Evolution 50: 268–281. https://doi.org/10.1016/j.ympev.2008.10.026
Mathews L.M., Schubart C.D., Neigel J.E. & Felder D.L. 2002. Genetic, ecological, and behavioural divergence between two sibling snapping shrimp species (Crustacea: Decapoda: Alpheus). Molecular Ecology 11: 1427–1437. https://doi.org/10.1046/j.1365-294X.2002.01539.x
Miller M.A., Pfeiffer W. & Schwartz T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE): 1–8. https://doi.org/10.1109/GCE.2010.5676129
Rambaut A., Suchard M.A., Xie D. & Drummond A.J. 2014. Tracer v1.6. Available from http://beast.bio.ed.ac.uk/Tracer
Ramos-Porto M. 1979. Ocorrência de Alpheus macrocheles (Hailstone) (Crustacea: Decapoda: Alpheidae) no norte e nordeste do Brasil. Trabalhos Oceanográficos da Universidade Federal de Pernambuco 14: 117–130. https://doi.org/10.5914/tropocean.v14i1.2570
Ramos-Porto M., Torres M.F.A. & Viana G.F.S. 1996. Crustáceos decápodos coletados durante as expedições Nordeste III e Pavasas I (Penaeidea e Caridea). Trabalhos Oceanográficos da Universidade Federal de Pernambuco 24: 211–227. https://doi.org/10.5914/tropocean.v24i1.2709
Ronquist F., Teslenko M., van der Mark P., Ayres D.L., Darling A., Höhna S., Larget B., Liu L., Suchard M.A. & Huelsenbeck J.P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542. https://doi.org/10.1093/sysbio/sys029
Sambrook J., Fritsch E.F. & Maniatis T. 1989. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Nova York, USA.
Schubart C.D., Cuesta J.A. & Felder D.L. 2002. Glyptograpsidae, a new brachyuran family from Central America: larval and adult morphology, and a molecular phylogeny of the Grapsoidea. Journal of Crustacean Biology 22: 28–44. https://doi.org/10.1163/20021975-99990206
Soledade G.O. & Almeida A.O. 2013. Snapping shrimps of the genus Alpheus Fabricius, 1798 from Brazil (Caridea: Alpheidae): updated checklist and key for identification. Nauplius 21: 89–122. https://doi.org/10.1590/S0104-64972013000100010
Soledade G.O., Scioli J.A., Terossi M., Mantelatto F.L. & Almeida A.O. 2019. Congruence between morphology and molecular data supports the distinction between the snapping shrimps Alpheus macrocheles and A. amblyonyx (Caridea, Alpheidae). Zootaxa 4624: 1–22. https://doi.org/10.11646/zootaxa.4624.1.1
Souza J.A.F., Schwamborn R., Barreto A.V., Farias I.D., Fernandes L.M.G. & Coelho P.A. 2011. Marine and estuarine shrimps (Dendrobranchiata, Stenopodidea, and Caridea), of Pernambuco state (Brazil) and northeastern Brazilian oceanic islands. Atlântica 33: 33–63. https://doi.org/10.5088/atl.2011.33.1.33
Tamura K., Peterson D., Peterson N., Stecher G., Nei M. & Kumar S. 2011. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731–2739. https://doi.org/10.1093/molbev/msr121
Udekem d’Acoz C. d’ 1999. Inventaire et distribution des crustacés décapodes de l’Atlantique nord-oriental, de la Mediterranée et des eaux adjacentes au nord de 25ºN. Patrimoines Naturels 40: 1–393. Muséum nationale d'histoire naturelle, Paris.
Williams S.T., Knowlton N., Weigt L.A. & Jara J.A. 2001. Evidence for three major clades within the snapping shrimp genus Alpheus inferred from nuclear and mitochondrial gene sequence data. Molecular Phylogenetics and Evolution 20: 375–389. https://doi.org/10.1006/mpev.2001.0976
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