Reassessment of the taxonomic status of Pseudopaludicola parnaiba (Anura, Leptodactylidae, Leiuperinae), with the description of a new cryptic species from the Brazilian Cerrado
Abstract
References
Andrade F.S. & Carvalho T.R. 2013. A new species of Pseudopaludicola Miranda-Ribeiro (Leiuperinae: Leptodactylidae: Anura) from the Cerrado of southeastern Brazil. Zootaxa 3608 (5): 389–397. https://doi.org/10.11646/zootaxa.3608.5.7
Andrade F.S., Magalhães F.M., Nunes-de-Almeida C.H.L., Veiga-Menoncello A.C.P., Santana D.J., Garda A.A., Loebmann D., Recco-Pimentel S.M., Giaretta A.A. & Toledo L.F. 2016. A new species of long-legged Pseudopaludicola from northeastern Brazil (Anura, Leptodactylidae, Leiuperinae). Salamandra 52: 107–124.
Andrade F.S., Haga I.A., Bang D.L. & Giaretta A.A. 2017a. The differential acoustic diagnosis between two Pseudopaludicola sister species (Anura, Leptodactylidae, Leiuperinae). Zootaxa 4319 (2): 391–400. https://doi.org/10.11646/zootaxa.4319.2.12
Andrade F.S., Leite F.S.F., Carvalho T.R., Bernardes C.S. & Giaretta A.A. 2017b. First record of Pseudopaludicola pocoto Magalhães, Loebmann, Kokubum, Haddad & Garda, 2014 (Anura, Leptodactylidae, Leiuperinae) in Bahia state, northeastern Brazil, with further data on its advertisement call. Check List 13 (1): 2047. https://doi.org/10.15560/13.1.2047
Andrade F.S., Haga I.A., Lyra M.L., Leite F.S.F., Kwet A., Haddad C.F.B., Toledo L.F. & Giaretta A.A. 2018a. A new species of Pseudopaludicola Miranda-Ribeiro (Anura: Leptodactylidae: Leiuperinae) from eastern Brazil, with novel data on the advertisement call of Pseudopaludicola falcipes (Hensel). Zootaxa 4433 (1): 71–100. https://doi.org/10.11646/zootaxa.4433.1.4
Andrade F.S., Haga I.A., Lyra M.L., Carvalho T.R., Haddad C.F.B., Giaretta A.A. & Toledo L.F. 2018b. A new species of Pseudopaludicola (Anura, Leptodactylidae, Leiuperinae) from the state of Minas Gerais, Brazil. European Journal of Taxonomy 480: 1–25. https://doi.org/10.5852/ejt.2018.480
Andrade E.B., Ferreira J.S., Takazone A.M.G., Libório A.E.C. & Weber L.N. 2018c. Description of the tadpole of Pseudopaludicola canga Giaretta and Kokubum, 2003 (Anura: Leptodactylidae). South American Journal of Herpetology 13: 64–72. https://doi.org/10.2994/SAJH-D-17-00032.1
Andrade F.S., Silva L.A., Koroiva R., Fadel R.M. & Santana D.J. 2019. A new species of Pseudo-paludicola Miranda-Ribeiro, 1926 (Anura: Leptodactylidae: Leiuperinae) from an Amazonia-Cerrado transitional zone, state of Tocantins, Brazil. Journal of Herpetology 53 (1): 68–80. https://doi.org/10.1670/18-125
Archer E. 2018. rfPermute: Estimate Permutation p-values for Random Forest Importance Metrics (Computer software). R package ver. 2.0.1.
Available from https://CRAN.R-project.org/package=rfPermute [assessed 1 April 2019].
Bioacoustics Research Program. 2014. Raven Pro: Interactive Sound Analysis Software, ver. 1.5. The Cornell Lab of Ornithology, Ithaca, New York. Available from http://www.birds.cornell.edu/raven [accessed 5 Feb. 2015].
Brown S.D.J., Collins R.A., Boyer S., Lefort M.C., Malumbres-Olarte J., Vink C.J. & Cruickshank R.H. 2012. SPIDER: an R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Molecular Ecology Resources 12: 562–565. http://doi.org/10.1111/j.1755-0998.2011.03108.x
Cardozo D. & Suárez P. 2012. Osteological description of Pseudopaludicola canga with implications for the taxonomic position of this taxon. Zootaxa 3515: 75–82. https://doi.org/10.11646/zootaxa.3515.1.6
Cardozo D.E., Baldo D., Pupin N., Gasparini J.L. & Haddad C.F.B. 2018. A new species of Pseudopaludicola (Anura, Leiuperinae) from Espírito Santo, Brazil. PeerJ 6: e4766. https://doi.org/10.7717/peerj.4766
Carvalho T.R. 2012. A new species of Pseudopaludicola Miranda-Ribeiro (Leiuperinae: Leptodactylidae: Anura) from the Cerrado of southeastern Brazil with a distinctive advertisement call pattern. Zootaxa 3328: 47–54. https://doi.org/10.11646/zootaxa.3328.1.4
Carvalho T.R., Teixeira B.F.V., Martins L.B. & Giaretta A.A. 2015a. Intraspecific variation and new distributional records for Pseudopaludicola species (Anura, Leptodactylidae, Leiuperinae) with trilled advertisement call pattern: diagnostic characters revisited and taxonomic implications. North-Western Journal of Zoology 11: 262–273.
Carvalho T.R., Borges-Martins M., Teixeira B.F.V., Godinho L.B. & Giaretta A.A. 2015b. Intraspecific variation in acoustic traits and body size, and new distributional records for Pseudopaludicola giarettai Carvalho, 2012 (Anura, Leptodactylidae, Leiuperinae): implications for its congeneric diagnosis. Papéis Avulsos de Zoologia 55: 245–254. https://doi.org/10.1590/0031-1049.2015.55.17
Charif R.A., Waack A.M. & Strickman L.M. 2010. Raven Pro 1.4 User’s Manual. Cornell Lab of Ornithology, Cornell University, USA.
Available from http://ravensoundsoftware.com/wp-content/uploads/2017/11/Raven14UsersManual.pdf [assessed 3 Jun. 2020].
de Queiroz K. 1998. The general lineage concept of species, species criteria, and the process of speciation and terminological recommendations. In: Howard D.J. & Berlocher S.H. (eds) Endless Forms: Species and Speciation: 57–75. Oxford University Press, Oxford.
de Queiroz K. 2007. Species concepts and species delimitation. Systematic Biology 56 (6): 879–886. https://doi.org/10.1080/10635150701701083
Duré M.I., Schaefer E.F., Hamann M.I. & Kehr A.I. 2004. Consideraciones ecológicas sobre la dieta, la reproducción y el parasitismo de Pseudopaludicola boliviana (Anura, Leptodactylidae) de Corrientes, Argentina. Phyllomedusa 3: 121–131. https://doi.org/10.11606/issn.2316-9079.v3i2p121-131
Fišer C., Robinson C.T. & Malard F. 2018. Cryptic species as a window into the paradigm shift of the species concept. Molecular Ecology 27 (3): 613–635. https://doi.org/10.1111/mec.14486
Frost D.R. 2020. Amphibian Species of the World: an Online Reference. ver. 6.0. American Museum of Natural History, New York.
Available from http://research.amnh.org/herpetology/amphibia/index.html [accessed 3 Apr. 2020].
Gerhardt H.C. 1991. Female mate choice in treefrogs: static and dynamic acoustic criteria. Animal Behaviour 42: 615–635. https://doi.org/10.1016/S0003-3472(05)80245-3
Giaretta A.A. & Kokubum M.N.C. 2003. A new species of Pseudopaludicola (Anura, Leptodactylidae) from northern Brazil. Zootaxa 383: 1–8. https://doi.org/10.11646/zootaxa.383.1.1
Giaretta A.A. & Facure K.G. 2009. Habitat, egg-laying behaviour, eggs and tadpoles of four sympatric species of Pseudopaludicola (Anura, Leiuperidae). Journal of Natural History 43: 995–1009. https://doi.org/10.1080/00222930802702456
Guimarães L.D., Lima L.P., Juliano R.F. & Bastos R.P. 2001. Vocalizações de espécies de anuros (Amphibia) no Brasil Central. Boletim do Museu Nacional, Zoologia (Nova Série) 474: 1–15. https://doi.org/10.1590/S0073-47212003000200005
Guarnizo C.E., Paz A., Muñoz-Ortiz A., Flechas S.V., Méndez-Narváez J. & Crawford A.J. 2015. DNA Barcoding survey of anurans across the eastern cordillera of Colombia and the impact of the Andes on cryptic diversity. PLoS ONE 10 (5): e0127312. https://doi.org/10.1371/journal.pone.0127312
Haddad C.F.B. & Cardoso A.J. 1987. Taxonomia de três espécies de Pseudopaludicola (Anura, Leptodactylidae). Papéis Avulsos de Zoologia 36: 287–300.
Haga I.A., Andrade F.S., Bruschi D.P., Recco-Pimentel S.M. & Giaretta A.A. 2017. Unrevealing the leaf frogs Cerrado diversity: A new species of Pithecopus (Anura, Arboranae, Phyllomedusidae) from the Mato Grosso state, Brazil. PLoS ONE 12 (9): e0184631. https://doi.org/10.1371/journal.pone.0184631
Heyer W.R., Rand A.S., Cruz C.A.G., Peixoto O.L. & Nelson C.E. 1990. Frogs of Boracéia. Arquivos de Zoologia 31: 235–410.
Hothorn T., Hornik K., Van De Wiel M.A. & Zeileis A. 2008. Implementing a class of permutation tests: the coin package. Journal of Statistical Software 28: 1–23. https://doi.org/10.18637/jss.v028.i08
ICZN 1999. International Code of Zoological Nomenclature, 4th Edition: adopted by the International Union of Biological Sciences. The International Trust for Zoological Nomenclature. Available from https://www.iczn.org/the-code/the-international-code-of-zoological-nomenclature/the-code-online/ [accessed 26 Mar. 2020].
Katoh K. & Standley D.M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30 (4): 772–780. https://doi.org/10.1093/molbev/mst010
Köhler J., Jansen M., Rodríguez A., Kok P.J.R., Toledo L.F., Emmrich M., Glaw F., Haddad C.F.B., Rödel M.O. & Vences M. 2017. The use of bioacoustics in anuran taxonomy: theory, terminology, methods and recommendations for best practice. Zootaxa 4251: 1–124. https://doi.org/10.11646/zootaxa.4251.1.1
Langone J.A., Lavilla E.O., Sá R.O. & Cardozo D. 2015. Comments on the type locality, type series, and geographic distribution of Pseudopaludicola falcipes (Hensel, 1867) (Amphibia, Anura). Zootaxa 4058 (1): 145–150. https://doi.org/10.11646/zootaxa.4058.1.12
Langone J.A., Camargo A. & Sá R.O. 2016. High genetic diversity but low population structure in the frog Pseudopaludicola falcipes (Hensel, 1867) (Amphibia, Anura) from the Pampas of South America. Molecular Phylogenetics and Evolution 95: 137–151. https://doi.org/10.1016/j.ympev.2015.11.012
Liaw A. & Wiener M. 2002. Classification and regression by randomForest. R News 2: 18–22.
Lobo F. 1994. Descripción de una nueva especie de Pseudopaludicola (Anura: Leptodactylidae), redescripción de P. falcipes (Hensel, 1867) y P. saltica (Cope, 1887). Cuadernos de Herpetología 8: 177–199.
Lobo F. 1995. Análisis filogenético del género Pseudopaludicola (Anura: Leptodactylidae). Cuadernos de Herpetologia 9: 21–43.
Lynch J.D. 1989. A review of leptodactylid frogs of the genus Pseudopaludicola in northern South America. Copeia 3: 577–588. https://doi.org/10.2307/1445483
Lyra M.L., Haddad C.F.B. & Azeredo-Espin A.M.L. 2017. Meeting the challenge of DNA barcoding Neotropical amphibians: polymerase chain reaction optimization and new COI primers. Molecular Ecology Resources 17 (5): 966–980. https://doi.org/10.1111/1755-0998.12648
Magalhães F.M., Loebmann D., Kokubum M.N.C., Haddad C.F.B. & Garda A.A. 2014. A new species of Pseudopaludicola (Anura: Leptodactylidae: Leiuperinae) from northeastern Brazil. Herpetologica 70: 77–88. https://doi.org/10.1655/HERPETOLOGICA-D-13-00054
Maniatis T., Fritsch E.F. & Sambrook J. 1982. Molecular Cloning: a Laboratory Manual. Cold Spring Harbor Laboratory, New York.
Miller M.A., Pfeiffer W. & Schwartz T. 2010. Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees. Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans. https://doi.org/10.1109/GCE.2010.5676129
Miranda-Ribeiro A. 1937. Alguns batrachios novos das colleções do Museo Nacional. O Campo 8: 66–69.
Myers N., Mittermeier R.A., Mittermeier C.G., da Fonseca G.A.B. & Kent J. 2000. Biodiversity hotspots for conservation priorities. Nature 403: 853–858. https://doi.org/10.1038/35002501
Neves M.O., Yves A., Pereira E.A., Alves L., Vasques J.B., Coelho J.F.T. & Silva P.S. 2019. Herpetofauna in a highly endangered area: the Triângulo Mineiro region, in Minas Gerais State, Brazil. Herpetozoa 32: 113–123. https://doi.org/10.3897/herpetozoa.32.e35641
Oliveira E.A., Hernández-Ruz E.J., de Carvalho J.C. & Sanches D. 2013. Geographic distribution: Pseudopaludicola canga. Herpetological Review 44: 104.
Oliveira S.R., Santos C.E., Souza A.O., Lima-Ribeiro M.S., Vergilio K., Zórtea M., Silva D.A., Melo F.R., Guilherme F.A.G., Vaz-Silva W. & Morais A.R. 2019. Species composition and reproductive modes of anurans from the southwestern state of Goiás, Brazil. Herpetology Notes 12: 491–499.
Pansonato A., Morais D.H., Ávila R.W., Kawashita-Ribeiro R.A., Strüssmann C. & Martins I.A. 2012. A new species of Pseudopaludicola Miranda-Ribeiro, 1926 (Anura: Leiuperidae) from the state of Mato Grosso, Brazil, with comments on the geographic distribution of Pseudopaludicola canga Giaretta & Kokubum, 2003. Zootaxa 3523: 49–58. https://doi.org/10.11646/zootaxa.3523.1.5
Pansonato A., Strüssmann C., Mudrek J.R. & Martins I.A. 2013. Morphometric and bioacoustic data on three species of Pseudopaludicola Miranda-Ribeiro, 1926 (Anura: Leptodactylidae: Leiuperinae) described from Chapada dos Guimarães, Mato Grosso, Brazil, with the revalidation of Pseudopaludicola ameghini (Cope, 1887). Zootaxa 3620: 147–162. https://doi.org/10.11646/zootaxa.3620.1.7
Pansonato A., Mudrek J.R., Veiga-Menoncello A.C.P., Rossa-Feres D.C., Martins I.A. & Strüssmann C. 2014a. A new species of Pseudopaludicola Miranda-Ribeiro, 1926 (Anura: Leptodactylidae: Leiuperinae) from northwestern state of São Paulo, Brazil. Zootaxa 3861: 249–264. https://doi.org/10.11646/zootaxa.3861.3.3
Pansonato A., Mudrek J.R., Simioni F., Martins I.A. & Strüssmann C. 2014b. Geographical variation in morphological and bioacoustic traits of Pseudopaludicola mystacalis (Cope, 1887) and a reassessment of the taxonomic status of Pseudopaludicola serrana Toledo, 2010 (Anura: Leptodactylidae: Leiuperinae). Advances in Zoology 2014: 1–13. https://doi.org/10.1155/2014/563165
Pansonato A., Veiga-Menoncello A.C.P., Mudrek J.R., Jasen M., Recco-Pimentel S.M., Martins I.A. & Strüssmann C. 2016. Two new species of Pseudopaludicola (Anura: Leptodactylidae: Leiuperinae) from eastern Bolivia and western Brazil. Herpetologica 72: 235–255. https://doi.org/10.1655/Herpetologica-D-14-00047.1
Pereira E.G. & Nascimento L.B. 2004. Descrição da vocalização e do girino de Pseudopaludicola mineira Lobo, 1994, com notas sobre a morfologia de adultos (Amphibia, Anura, Leptodactylidae). Arquivos do Museu nacional 62: 233–240.
R Core Team 2019. R: A Language and Environment for Statistical Computing. ver. 3.5.3. R Foundation for Statistical Computing, Vienna, Austria. Available from http://www.R-project.org/ [accessed 1 Jan. 2019].
Ramalho W.P., França D.P.F., Guerra V., Marciano R., Vale N.C. & Silva H.L.R. 2018. Herpetofauna of Parque Estadual Altamiro de Moura Pacheco: one of the last remnants of seasonal forest in the core region of the Brazilian Cerrado. Papéis Avulsos de Zoologia 58: e20185851. http://doi.org/10.11606/1807-0205/2018.58.51
Rivero J.A. & Serna M.A. 1985. Una nueva Pseudopaludicola (Amphibia: Leptodactylidae) cornuda del sureste de Colombia. Caribbean Journal of Science 20:169–171.
Roberto I.J., Cardozo D. & Ávila R.W. 2013. A new species of Pseudopaludicola (Anura, Leiuperidae) from western Piauí State, Northeast Brazil. Zootaxa 3636: 348–360. https://doi.org/10.11646/zootaxa.3636.2.6
Ruthven A.G. 1916. A new species of Paludicola from Colombia. Occasional Papers of the Museum of Zoology, University of Michigan 30: 1–3.
Stamatakis, A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313. https://doi.org/10.1093/bioinformatics/btu033
Strassburg B.B.N., Brooks T., Feltran-Barbieri R., Iribarrem A., Crouzeilles R., Loyola R., Latawiec A.E., Filho F.J.B.O., Scaramuzza C.A.M., Scarano F.R., Soares-Filho B. & Balmford A. 2017. Moment of truth for the Cerrado hotspot. Nature Ecology & Evolution 1: 0099. https://doi.org/10.1038/s41559-017-0099
Sueur J., Aubin T. & Simonis C. 2008. Seewave, a free modular tool for sound analysis and synthesis. Bioacoustics 18: 213–226. https://doi.org/10.1080/09524622.2008.9753600
Taylor W.R. & Van Dyke G.C. 1985. Revised procedures for staining and clearing small fishes and other vertebrates for bone and cartilage study. Cybium IX (2): 107–119.
Toledo L.F., Siqueira S., Duarte T.C., Veiga-Menoncello A.C.P., Recco-Pimentel S.M. & Haddad C.F.B. 2010. Description of a new species of Pseudopaludicola Miranda-Ribeiro, 1926 from the State of São Paulo, Southeastern Brazil (Anura, Leiuperidae). Zootaxa 2496: 38–480. https://doi.org/10.11646/zootaxa.2496.1.2
Vaidya G., Lohman D.J. & Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics 27: 171–180. https://doi.org/10.1111/j.1096-0031.2010.00329.x
Valdujo P.H., Carnaval A.C.O.Q. & Graham C. 2013. Environmental correlates of anuran beta diversity in the Brazilian Cerrado. Ecography 35: 1–10. https://doi.org/10.1111/j.1600-0587.2012.07374.x
Vaz-Silva W. & Maciel N.M. 2011. A new cryptic species of Ameerega (Anura: Dendrobatidae) from Brazilian Cerrado. Zootaxa 2826: 57–68. https://doi.org/10.11646/zootaxa.2826.1.3
Veiga-Menoncello A.C.P., Lourenço L.B., Strüssmann C., Rossa-Feres D.C., Andrade G.V., Giaretta A.A. & Recco-Pimentel S.M. 2014. A phylogenetic analysis of Pseudopaludicola (Anura) providing evidence of progressive chromosome reduction. Zoologica Scripta 43: 261–272. https://doi.org/10.1111/zsc.12048
Walker M., Lyra M.L. & Haddad C.F.B. 2018. Phylogenetic relationships and cryptic species diversity in the Brazilian Egg-Brooding tree frog, genus Fritziana Mello-Leitão 1937 (Anura: Hemiphractidae). Molecular Phylogenetic and Evolution 123: 59–72. https://doi.org/10.1016/j.ympev.2018.02.012
Watters J.L., Cummings S.T., Flanagan R.L. & Siler C.D. 2016. Review of morphometric measurements used in anuran species descriptions and recommendations for a standardized approach. Zootaxa 4072 (4): 477–495. http://doi.org/10.11646/zootaxa.4072.4.6
Copyright (c) 2020 Felipe Silva de Andrade, Isabelle Aquemi Haga, Mariana Lúcio Lyra, Thiago Ribeiro de Carvalho, Célio Fernando Baptista Haddad, Ariovaldo Antonio Giaretta, Luís Felipe Toledo

This work is licensed under a Creative Commons Attribution 4.0 International License.
Creative Commons Copyright Notices
Authors who publish with this journal agree to the following terms:
- Authors retain copyright and grant the journal right of first publication with the work simultaneously licensed under a Creative Commons Attribution License (CC BY 4.0) that allows others to share the work with an acknowledgement of the work's authorship and initial publication in this journal.
- Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the journal's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgement of its initial publication in this journal.
- Authors are NOT PERMITTED to post their submitted work online (e.g., in institutional repositories or on personal websites) prior to publication, as it may lead to nomenclatural issues.